About 7 years ago I started developing various water features, both garden ponds and water falls. As part of my research I found consistent comments like the following:ย you can’t make a natural pond using a pond liner without pumps and filters. The use of the word ‘natural’ here refers to the pond filtration system, not the esthetic look of the pond. I’ll deal with esthetics in a future post on how to build ponds.
In a natural pond the water, soil, plants, and animals all live in harmony. No one comes along to clean the pond or to aerate it. There is no big man-made filtration system that keeps the water clean. The common advice is that a pond liner is artificial and a pond built with it will never reach a natural state where the water, plants, and animals live in harmony the way they do in a natural pond. If you don’t filter such an unnatural pond it will become full of algae and the water will be dirty and smelly. The only way to have a pond with a liner is to add aeration and filtration.
Is this really true? Do you need pumps and filters to provide artificial pond filtration?

Building Natural Ponds
This blog post is the second most popular post ever on this site. Lots of people comment and are interested in more information about building natural ponds, so I have started a public Facebook Group to make it easier for people to discuss this hot topic. Please join the group at https://www.facebook.com/groups/1760349757565562/

What Happens in a Natural Pond?
In a natural pond animals (insects, fish, etc) eat, poop, sleep and die. Both the poop and dead animals add nutrients to the water. Some is added immediately, and some is added over time as the material is degraded by various micro-organisms.
Plants also add nutrients when they die. In fall all kinds of leaves and other dead plant material is blown into the pond, and as this material is decomposed by micro-organisms it also increases the nutrient level.
Algae is a plant that grows best with high light and high nutrient levels. When the nutrients get high enough, the algae takes over the pond and chokes everything else out.
Why does the algae not take over natural ponds? The answer is higher order pond plants (not including algae). Plants also use nutrients and as long as the plants in the pond use up the nutrients as fast as they are produced, algae has trouble getting a foot hold.
The secret to an algae fee pond is to control nutrient levels!
The other important part of a natural pond is the presence of micro-organisms. They are everywhere; in the soil, on rocks, and attached to plants. Think of these micro-organisms as the ‘cleaning machine’ of the pond. They take rotting, smelly animal and plant material and turn it into nutrients that plants and algae can use. The micro-organisms keep the water clean, and keep it from smelling.
A man-made pond made with a pond liner has no soil – so one source of micro-organisms is missing, especially if you keep cleaning the pond liner. Most ponds have few stones and few plants reducing the number of micro-organisms even further. Without microbes or filtration, the dead animals and plants just sit in the bottom, making the water cloudy and smelly. But it does not have to be this way – read on.
Controlling Nutrient Levels
There are a number of ways to control nutrient levels:
1) Don’t add too many fish. Too many fish results in too much fish poop. Koi poop more than gold fish.
2) Don’t feed fish. There are lots of natural things for the fish to eat. Adding extra food just adds more nutrients to the pond.
3) Have lots of living plants in the pond. With enough pond plants growing, they will remove the nutrients before the algae can grow.
Most man-made ponds are not designed to hold a lot of pond plants. Without the plants you need to add some type of mechanical filtration system.

The picture shows a pond at Aspen Grove Gardens during installation. The black pond liner is in the deep part and the planting shelves are covered in carpet (white/gray areas). The liner will be pulled up to cover the carpet.
Note the extensive size of the planting shelves compared to the total size of the pond.
Why Aerate a Water Feature?
A natural pond has no obvious aeration. There is no hidden pump creating air bubbles. So why is it needed in a man-made pond?
A poorly designed man-made pond does not have enough plants, and it does not have enough places for micro-organisms to live. As a result, dead stuff accumulates on the bottom. As this dead stuff starts to rot it uses up oxygen, and the water at the bottom becomes depleted in oxygen, which in turn causes anaerobic bacterial to grow. This type of bacterial loves the smelly mess and they thrive with low levels of oxygen. This seems like a good thing, and environmentally it is a good thing. The problem for us is that as they digest the rotting stuff, they make the water smell. We don’t like smelly ponds even if they are natural.
How do you get rid of the anaerobic bacteria? Simple, increase the level of oxygen by pumping air into the water.
Aeration is recommended for ponds so that they don’t smell and that works quite well. The problem is that without anaerobic bacteria, the sludge on the bottom degrades very slowly and so you also need to clean the bottom of the pond on a regular basis.
Think about this. Because you bought a pump and you aerate the water, you now need to do more work and clean the bottom.
Do Natural Ponds have Smelly Sludge at the Bottom?
Sure they do. It is quite normal to find this in a pond where a lot of animal or plant material falls into the water. You don’t normally smell it because the water is not stirred up enough to move the smells to the surface. Dig around with a shovel or step into it from a canoe and you’ll find the smell. The smelly sludge on the bottom is natural.
My man-made water features have sludge and anaerobic bacteria in the bottom. If I don’t disturb them, they degrade dead plant material, and produce nutrients for growing plants. In my ponds I don’t stir up the water so I don’t smell them.
Pond Filters
Virtually every reference on building water features recommends some type of filtration system for a man-made pond. Why is this necessary?
As mentioned above, the lack of soil in the bottom of the pond and the lack of rocks and plants results in an environment that houses few micro-organisms when compared to a natural pond. The solution is to provide a man-made place for the microbes to live. Most filtration systems contain some type of surface for the micro-organisms to live on. This can be sand, wool, small pieces of plastic – it doesn’t really mater. What is important is that there is a lot of surface area. Microbes like to attach themselves to a surface and then ‘eat’ plant and animal bits as they float by in the water. So the filter replaces the natural places were microbes live–on soil, rocks and plants.
In nature the microbes live in the slime you find on rocks. It is healthy for a pond.
Water Feature Myth
The above information should give you some background to understand both natural and man-made ponds. If you think about it for a while you will realize that a properly designed pond, with enough pond plants and homes for microbes,ย should work just as well as a natural pond. When I was planning to build my ponds I spent a lot of time trying to find a reference for a man-made pond that worked without pumps and filters – I found none. Every reference I found said that such a pond will not work.
I set out to prove the experts wrong.
The following is not the result of good research or the opinions of experts. It is the result of my experience with two ponds over a 6 year period. In this blog I am not describing how to make a pond but I will do that in another blog entry–some day. I will provide the key points to consider.
Based on the information above, a pond design needs two things which are lacking in most designs. It needs lots of pond plants. Plants will use up the excess nutrients and keep the algae in control. It also needs lots of little homes for microorganism – they will help keep the water clean.
The following are some key design decisions:
1) Wide planting shelves. My pond is 20 x 30 feet and about half of that area is in the form of planting shelves that are about 8 inches deep.
2) Soil is not used for the plants. Pond plants don’t need a substrate, except to hold them down, and the pond certainly does not need more nutrients from soil. The plants should be using the nutrients produced by the micro-organisms and not the nutrients in soil . Instead of soil, I use small rocks – 1/2 inch or so. I just use all the small rocks I collect as I make new flower beds. Don’t fertilize your plants.
3) Pond plants are not in pots. I just place them on the small rocks in the planting shelf. A larger rock on top holds them in place until they root.
4) The sides of the pond are lined with rocks adding more surface area for microbes.
5) A deep planting shelf (about 2 ft deep)ย is also present for waterlilies. It is important to cover 2/3 of the surface water to reduce light getting to algae.
6) Goldfish were added to feed the plants, and eat mosquito larvae . They are never fed. They grow quickly and breed regularly.
The garden pond in the pictures was built 5 years ago and it is only now that the planting shelves are starting to be full of plants. Wild bull rushes seeded themselves the second year. Irises have been added and are spreading. The pond has never been drained, and the bottom is never cleaned. It has no pump and no filter. Wind is the only thing that might provide some aeration as it ripples across the surface of the water. There are several large trees around the pond that add fall leaf drop – which is left to settle in the pond.
For the first 4 years the pond plants increased in number each year. During this time, I did have string algae, but it mostly had a spring bloom and by mid summer it was under control. The water was very green showing the presence of lots of one celled algae, but the water was clean, and it did not smell. The fish that were added the first year did not over winter but since year two they have overwintered and keep breeding. Herons and racoons help to keep numbers in check.
From a naturists point of view the pond is very healthy with lots of frogs and dragon flies breeding each year. Larger mammals, including deer use it as a water source.
It is now nearing the end of summer 2013 and the pond has been extremely clean–much clearer than the picture below from 2012. In fact it is too clean. You can now see the pond liner in the deeper sections of the pond. There was no string algae this year and almost no one celled algae. It has been a strange year weather wise which may account for some of this, but I think it is mostly due to the fact that the planting shelves are now very full of hungry plants which are out-competing the algae.
After 5 years I conclude that aeration and filtration are ‘probably’ not required. I’ll need to wait another 5 years or so to be absolutely certain of this. It is possible that in a few more years the stuff at the bottom will overwhelm the pond and may need to be removed. I doubt it!

String algae is gone, but one celled algae is still making the water green in late summer. Note the number of plants in the water.

As plants grow and get larger, algae is almost non-existant.
Is Green Water Bad?
From an environmental point of view there is nothing wrong with water that contains algae. In a natural pond it might indicate that too much fertilizer has leached into the pond which is not good. But this is not usually a problem in a man-made garden pond. If your pond water is green with algae it is probably healthy.
You might not like the look – that is a different matter.
In Japan, garden ponds are treasured and it is common to buy a dye to color the pond water. Why do they do that? When the water is colored it reflects light much better. The shadows and reflections are considered to be very desirable. So next time someone comments about your green water, just tell them that you do it on purpose to better enjoy the reflections.
If You Have Questions
If you have further questions about building natural ponds or about your existing pond please post them in our new face book group called Building Natural Ponds.
Beneficial Pond Bacteria
natural ponds do not need to have bacteria added. For more on this topic have a look at Beneficial Pond Bacteria – A Waste of Money.






can you swim in these ponds? How small can you go and keep the balance? Is it harder in a big pond or easier to keep it healthy?
You can swim in them. In fact natural pools are becoming popular in Europe. I don’t know how small you can go, but it is certainly easier to keep in balance in a larger pond.
Hi Robert,
Great post! I purchased a house with a 100×50′ kidney shaped pond that is lined on the property. There are decorative rocks around the edge but nothing in the pond and most of the sides have a good slope to them. Any ideas on how I could add plants to help clear up the water? I thought about nets on the side with rocks?? Before I found this post, I had added a aerator to the deep end which is about 6′. The pond slopes from shallow to deep. There is also a fountain in the pond. I had a lot of algae last summer due to lawn fertilizer making its way in. I really want to have clear water to allow the family to swim. It’s a shame to have such a large pond and not be able to swim. Any ideas from you or your readers would be greatly appreciated. Thanks again for the great post!
With out planting shelves it is difficult to add enough plants to keep the pond clear of algae. Since the pond is built it may be best to look at mechanical filters to do the job. An alternative is to add a second pond beside the first, and use if for filtering the water. the second would be shallow and full of plants. Water would be pumped to the second pond, and allowed to flow back to the main one.
I haven’t used many shelves in my ponds. (Although I know I should!) Instead I kinda build my own, by placing a big flat rock on top of other rocks, making a kind of table. The plants sit on the table, and the fish have a fun cave underneath!
And I have to say, you should work on preventing any runoff from your yard, from entering the pond. Try building up a berm around the edge.
And I must add that I’ve always dreamed of having a bog filter like you described there.Bogs are cool.
I bought floating plants for aquariums which do not require anchoring and they propogated so well I’ve had to remove some! You can try those if you do not have planting shelves. Worked great for me.
Hi Robert,
I’d like to know if you think a cement pond is as good as a pond with a plastic liner.
Not in cold climates. If you have frost, cement will eventually crack. In warm climates it will probably work just as well. A newly made pond could be quite alkaline and you might need to replace the water a few times to reduce the pH.
I have 3 natural ponds and all run excellent, i have the perfect balance as you explain. Resulting in frogs white clouds and goldfish regularly breeding, however i had mosquito fish and they were awful fish. Not worthy of any water, to the point where a few were chucked into my aquarium gunk tub used strictly as high potent liquid fertiliser. They live in it to this day, well at least the smallest one was last seen !!
This is wonderful but p,ease someone tell me, do I need to change my pool liner or can I just throw in dirt and rocks around it? I would like an aesthetic waterfall but loathe to spend money on filtration and aeration. Am I ok to do this? Aussie here. Pool killing me to mai Tain. Kid wants turtles so…….
I am not sure what your question is. If you are thinking of getting rid of the pond and filling it with soil, I would remove the liner.
Yes sorry, iPad typing. I wanted to know if I could retain the pool liner for the pond and if filtration or anything electrical is absolutely not required unless I wanted a waterfall.
I am not familiar with pool liners, but I suspect they are thinner than pond liners, and as such might not last as long. On the other hand, pool liners have a back support to protect them. You can certainly use them provided they hold water. everything else I write about should apply to a pond build in an old pool. adding planting shelves might be a problem.
Your article confirms my initial thoughts RE: pond construction. Around 2001, I installed a pond at our hiking club’s remote cabin (no electricity, no running water) in SE Pa. near the Appalachian Trail. While I did have a solar-powered pump (a PV-direct system), I also used the shallow end of the pond as a plant-and-stone-filled “filter”. After several years, the pond approached “eco-system stability”, but the liner was damaged by a bear looking for a frog dinner! We patched the liner, but the bear came back, this time slashing the PVC liner beyond repair. This coming year, I will replace the liner with an EPDM rubber one. But what else can I do to mitigate any on-going bear damage??
EPDM is quite tough. I tried to poke a hole with a knife and had a real hard time. don’t know much about bears.
Well, we survived the summer, but on Dec 24 (in the upper 60s in Pennsylvania!) we are experiencing the worst algae bloom since we installed the pond. I got alarmed when I saw the fish at the top of the very cloudy water, evidently seeking oxygen (just like you said. Robert). We scooped out a fair amount of algae and decaying leaves and set a sprinkler on an exposed rock to aerate the water. I haven’t seen the fish again and the water looks somewhat less cloudy. Any other things we should do? Thanks and merry Christmas!
The fish were indeed gulping air to get oxygen. Better than a sprinkler are air bubbles. You can use an aquarium pump for them. The air bubbles will also tend to keep the pond from getting a solid covering of ice. Once the ice is solid there is no gas exchange and CO2 builds up.
The warm temperatures probably increased the decomposition of the leaves, and the normal pond plants are already dormant. Nutrients being produced with nothing to use them up except algae.
Thanks very much. Do we need to meet a certain gph or other criteria for the pump to be effective? Our pond is (very roughly) 3500 gallons.
You use the air pump to just keep a small hole in the ice so it does not need to be a big pump. The amount of air needed depends on how cold it gets and how long the cold lasts. I don’t have any recommendation on size.
I am planning on digging a rather large pond for fish and swilling. Just need to decide bass and blue gill or kio, always wanted kio. But would me swimming in it stir up the dead matter at the bottom?
Yes it will – to the same extent that it happens in a natural lake.
I like your post and recommendations. I notice in the past, especially in around the 18th century, ponds existed that were created without pumps or filters and they still had fish in them that were able to survive. I also notice that these ponds had water plants, as you said, like lilies or lotus.
I would like to create such a pond where I live but I believe I need additional guidance especially as to how to ensure the pond’s water level remains as constant as possible. Any suggestions.
Natural ponds don’t maintain a constant level and it is not needed for pond health.
To keep a constant level you have two problems; too much water and too little water.
If too little, all you can do is add more.
You need to design for too much. I always include an area where the edge of the pond is lower than any other point. that way when it rains too much, I know where the excess will flow. I make sure it flows away from the pond – you don’t want it flowing under the liner.
Loved the article. I have a 100 gallons preformed pond. And have it all winterized and ready to go with a heater in it. I leave two pumps running but not sure if I should take the filters out and just leave the pumps running. I live near Chicago, Illinois and winters are brutal. The ice in my pond never completely freezes over, but it is harder getting the filters out every couple of weeks to clean them, especially since I am getting up in age. Can I just leave the pumps running to circulate the water for the fish, or do you suggest keeping the filters in there too?
The filters might be protecting the pump from damage. I would not remove them.
On my waterfall, I take the pump inside in winter.
I was so excited to find this post and this blog, and to hear that others in even less tropical environments than my zone 6 Ozarks have successfully created natural backyard ponds.
My 15x30ish concrete swimming pool has been home to a thriving population of goldfish and a handful of pond plants for several years with no intervention of any sort. The population of fish has grown, it has resident frogs and even at least one young pond turtle. It also attracts many dragonflies. I would like to make it more accommodating to the needs of the birds and small mammals, as it currently is still steep sided with only floating logs and milk-crates for self-rescue, but no easy way for animals to approach safely to drink. Because the bottom slopes toward a small deep area in the middle, I can’t just dump in rock and dirt to create sloping sides, and I don’t want to lose the depth in the middle because I want to be certain all the residents have a place to retreat to in the coldest part of winter. I am on a ‘no-budget’ budget, but imagined perhaps tipping in wheelbarrow loads of large hunks of broken concrete and broken concrete blocks that would slide to the bottom, creating something against which future wheelbarrow loads of debris could rest against, then I could add soil and give it time to settle then see what I’ve got before adding more material around the edges in hopes that it would pile up creating the sloped sides in time. I would love to hear other ideas and suggestions for how I might accomplish all this, since I have all winter ahead of me to accumulate materials in anticipation of improving the pond habitat in the spring once everything has come out of winter hibernation.
I would not fill the center in case you decide you want it open in the future, Why not just make a raised corner using stacked cement bricks. You don’t need a big beach for animals.
Found this site again! Yes, Robert I think that’s a better idea. The more I read the more I see that my original plan had a lot of flaws. The shallower end of the pond is flat and lends itself to stacking cement blocks, and while it’s only about 1/3 the surface area of the pond overall, I think if I get the right plants growing there it will filter the water enough to even use the other 2/3 of the pond as a swimming hole.